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Cancer Cytogenetics |
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Collaborations to validate the probes are welcomed
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clone
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map
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clone
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map
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p58
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see p58
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1p36.33
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chr1:1567954-1568953
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p58
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NUP214
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9q34.13
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chr9:129241299-129438317
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AF1p
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1p33
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chr1:51253319-51394988
chr1:51141506-51255318 |
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MLLT10
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10p12.31
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chr10:21761434-21873744
chr10:21850025-21990020 |
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AF1q
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1q21.3
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chr1:148102866-148294961
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SSH3BP1
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10p12.1
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chr10:26955478-27152755
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TPM3
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1q21.3
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chr1:151341874-151461333
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ERCC6
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10q11.23
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chr10:50080003-50256048
chr10:49914271-50087538 |
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NTRK1
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1q23.1
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chr1:153996557-154096358
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NTRK1
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H-RAS
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11p15.5
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chr11:626031-626602
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FCGR2B
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FANCF
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11p14.3
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chr11:22663207-22842352
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PBX1
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see PBX1
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1q23.3
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chr1:161716339-162003685
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EXT2
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11p11.2
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chr11:44167804-44335132
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ABL2
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1q25.2
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chr1:176312576-176494663
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DDB2
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11p11.2
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chr11:47095390-47284797
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MYCN
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see MYC-N
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2p24.3
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chr2:16102424-16104004
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CCND1
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11q13.3
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chr11:69226211-69387715
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ALK
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2p23.2
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chr2:29993794-30137234
chr2:29837721-29995793 chr2:29703354-29839720 chr2:29382143-29574791 |
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CALM
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11q14.2
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chr11:85369418-85559941
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BCL11A
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2p16.1
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chr2:60674124-60811132
chr2:60524043-60676123 |
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EED
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11q14.2
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chr11:85661996-85730995
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-
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IGK@
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see IG-K2
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2p11.2
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chr2:89228810-89229310
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DDX10
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11q22.3
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ERCC3
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2q14.3
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chr2:127978105-128171752
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ATM
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see ATM
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11q22.3
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chr11:107631490-107773907
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ALK7
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2q24.1
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ALK7
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POU2AF1
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11q23.1
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chr11:110751750-110802108
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ATIC
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2q35
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chr2:216338156-216434783
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FLI1
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RP11-744N12
see FLI1 |
11q24.3
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chr11:128056082-128273474
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FLI1
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GHRELIN/
MTLRP |
3p25.3
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chr3:10137483-10347535
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MLL
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see MLL
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11q23.3
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chr11:120663875-120749534
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FANCD2
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3p25.3
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chr3:10176764-10177540
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CBL
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11q23.3
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chr11:118691675-118874096
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CTNNB1
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3p22.1
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chr3:41157669-41340307
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ZNF145
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see PLZF
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11q23.2
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chr11:113471599-113659023
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AF3p21
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3p21.31
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chr3:48558394-48744924
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PKNOX2
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11q24.2
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chr11:124717647-124889728
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PKNOX2
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TFG
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3q12.2
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chr3:101628420-101808186
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TFG
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ETV6
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see ETV6
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12p13.2
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chr12:11694304-11935825
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EIF4A2
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3q27.3
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chr3:187755365-187888239
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CDKN1B
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12p13.2
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chr12:12595417-12800616
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BCL6
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3q27.3
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chr3:188696331-188821725
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ATF1
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12q13.12
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chr12:49431788-49550795
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FGFR3
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4p16.3
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chr4:1757261-1772237
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HMGIC
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12q14.3
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chr12:64436297-64534781
chr12:65652495-65831249 |
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ARHH
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4p14
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chr4:40026966-40190492
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ALDH2
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12q24.12
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chr12:110640976-110778804
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PDGFRA
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4q12
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chr4:55042877-55175040
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-
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ZNF198
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13q12.11
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chr13:18304213-18446706
chr13:18628606-18756399 |
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CHIC2
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4q12
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chr4:54881380-54905371
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del. 13q14
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see del. at 13q14
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13q14
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KIT
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4q12
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chr4:55479406-55576043
chr4:55376562-55522392 |
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RB1
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see RB1
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13q14.2
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chr13:46675911-46854023
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MLLT2
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4q21.3
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CDX2
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13q12.2
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chr13:26314162-26390882
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CKN1
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5q12.1
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chr5:60170215-60351021
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ERCC5
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13q33.1
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chr13:101065633-101237684
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APC
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5q22.2
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chr5:112040387-112210726
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TRA
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14q11.2
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chr14:20798749-20973793
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AF5q31
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5q31.1
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chr5:132125029-132293095
chr5:132128529-132295841 |
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IGH@
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see IGH
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14q32.3
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EGR1
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5q31.2
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chr5:137782423-137968697
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EGR1
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PML
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see PML
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15q24.1
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chr15:72002830-72051499
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CSF1R
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5q33.1
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chr5:149443741-149633779
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CSF1R
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ERCC4
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16p13.12
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chr16:13892254-14041999
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PDGFRB
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5q33.1
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chr5:149515843-149714243
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PDGFRB
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CREBBP
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16p13.3
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chr16:3860640-4025836
chr16:3592545-3783358 |
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NPM1
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5q35.1
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chr5:170727844-170902961
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MYH11
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see MYH11
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16p13.11
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chr16:15763432-15917317
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DEK
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6p22.3
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chr6:18293483-18402972
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CBFB
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see CBFb
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16q22.1
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chr16:66839536-66911193
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HMGIY
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6p21.31
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chr6:34147294-34299121
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NQO1
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16q22.1
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chr16:69383598-69515291
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FANCE
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6p21.31
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chr6:35340451-35510695
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GAS7
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17p13.1
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chr17:10004915-10164545
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CDKN1A
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6p21.31
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chr6:36690134-36885440
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TRAF4
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17q11.2
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chr17:27120431-27296241
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AF6q21
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6q21
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chr6:108916456-108988709
chr6:108988610-109050509 |
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ERBB2
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see HER-2
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17q12
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chr17:38231443-38243546
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-
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FOP
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6q27
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chr6:167290986-167423775
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TP53
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see p53
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17p13.1
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chr17:7772280-7791488
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AF6
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6q27
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chr6:167849762-167997724
chr6:168048666-168136445 |
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RARA
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see RARA
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17q21.2
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chr17:38860535-38861532
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EGFR
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7p11.2
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chr7:54819336-54997333
chr7:54997134-55122386 |
EGFR
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COL1A1
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17q21.33
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chr17:48703818-48921563
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HIP1
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7q11.23
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chr7:74739047-74920092
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ASPL
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17q25
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chr17:80670327-80766392
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TES
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7q31.2
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chr7:115308024-115511426
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TES
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BCL2
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see BCL2
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18q21.33
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chr18:59134103-59135014
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D7S522
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7q31.2
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chr7:115593665-115754252
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TCF3
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see E2A
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19p13.42
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chr19:59302141-59310848
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LPL
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8p21.3
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chr8:19809572-19811531
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LPL
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ERCC2
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19q13.32
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chr19:50513010-50673079
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FGFR1
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8p12
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chr8:38188451-38287165
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TFPT
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19q13.42
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chr19:59296928-59502282
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TFPT
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CBFA2T1
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see ETO
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8q21.3
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chr8:92928035-93031774
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D20S108
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20q12
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chr20:41506310-41556657
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-
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EXT1
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8q24.11
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chr8:118787931-118938925
chr8:118983736-119153643 |
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RUNX1
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see AML1
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21q22.12
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chr21:35013969-35214354
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MYC
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see MYC
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8q24.21
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chr8:128704918-128710036
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BCR
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see BCR
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22q11.23
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chr22:21847105-21982668
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JAK2
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9p24.1
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chr9:4819655-4991841
chr9:5008714-5181904 |
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IGL@
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see IGL
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22q11.23
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chr22:22239917-22247051
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MLLT3
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9p21.3
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chr9:20322007-20477786
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EWSR1
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22q12.2
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chr22:27934041-28089221
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CDKN2A
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9p21.3
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chr9:21899259-22000413
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CDKN2A
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AR
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Xq12
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AR
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FANCG
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9p13
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chr9:35020281-35215382
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MSN
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RP3-376D21
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Xq12
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chrX:63694018-63843688
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MSN
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FANCC
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9q22.32
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chr9:93172955-93276935
chr9:93276836-93434980 |
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AFX1
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Xq13.1
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chrX:69080876-69282072
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ABL1
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see ABL
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9q34.12
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chr9:128986497-129039105
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MTCP1
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Xq28
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chrX:152652354-152827934
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| Rearrangements | ||||||||||
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t(9;22)(q34;q11.2) |
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t(14;18)(q32.3;q21) |
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inv(16)(p13;q22) |
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t(8;14)(q24;q32) |
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8q24
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t(15;17)(q22;q21) |
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t(8;21)(q22;22.3) |
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Most of the probes are from P. de Jong libraries (BAC/PAC libraries)
- Atlas of Genetics and Cytogenetics in Oncology and Haematology (University Hospital, Poitiers)
- Cancer Chromosome
Aberration Project (Recurrent
Aberration Data...) (NCI)